PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY57196.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

Trihelix

Protein Properties

Length: 142aa MW: 14465.7 Da PI: 4.0043

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY57196.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	37.9	4.5e-12	91	129	1	39
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmr 39 rW+ qe+laL+++r++m+ ++r++ k+plWe+vs+++ GAY57196.1 91 RWPSQETLALLKIRSDMDAAFRDATVKGPLWEDVSRYIT 129 8***********************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 142 aa Download sequence
MQQGGGGGGD GEGGGGGGGT QSQYGEMATT STATAAAAAA HIDMGQQPVE AASPISSRPP 60 ASASNLDELM RLSGGDDDEG DRGGGVSSGN RWPSQETLAL LKIRSDMDAA FRDATVKGPL 120 WEDVSRYITD YQSELLMLAQ LS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G76880.1	1e-17	Trihelix family protein