PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY57320.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family MYB_related
Protein Properties Length: 96aa    MW: 10757 Da    PI: 9.773
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY57320.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding29.22.1e-091358245
                     SSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHH CS
  Myb_DNA-binding  2 grWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwq 45
                     g+WT+e  + + +a + + ++   +W  +ar +g g+t+ ++k ++ 
       GAY57320.1 13 GSWTAEQNKAFERALAVYDKDtpdRWYNVARAVG-GKTADEVKKHYE 58
                     89********************************.**********96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 96 aa     Download sequence    
MASSSMSSRG SSGSWTAEQN KAFERALAVY DKDTPDRWYN VARAVGGKTA DEVKKHYELL  60
VEDIKHIESG HVPFPKYRTP SGNGNVGERM KNLKFH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G39250.12e-38MYB_related family protein