PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY57416.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

NF-YB

Protein Properties

Length: 157aa MW: 17658.8 Da PI: 8.472

Description

NF-YB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY57416.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NF-YB	160.2	3.1e-50	3	98	2	97
NF-YB 2 reqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrelegek 97 +eqd++lPianv++imk++lP +akisk+ak+t+qec++efisfvt+easdkc++e+rkt+ngdd++wal+tlGf++y e++ yl+kyre e+e+ GAY57416.1 3 EEQDKLLPIANVGKIMKQILPPRAKISKEAKQTMQECATEFISFVTGEASDKCHKENRKTVNGDDICWALSTLGFDNYTEAIVRYLHKYREDERER 98 79******************************************************************************************9987 PP

Sequence ? help Back to Top
Protein Sequence Length: 157 aa Download sequence
MVEEQDKLLP IANVGKIMKQ ILPPRAKISK EAKQTMQECA TEFISFVTGE ASDKCHKENR 60 KTVNGDDICW ALSTLGFDNY TEAIVRYLHK YREDERERAK NQSKVTATSS NEDKAKESPS 120 HKSREQTTSV QQIDETSSAP SELRALKKGK SSLTNPP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G09030.1	5e-57	NF-YB family protein