PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY57492.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

G2-like

Protein Properties

Length: 419aa MW: 46664.6 Da PI: 9.4662

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY57492.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	101.8	4.4e-32	248	301	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 pr+rWt++LH+rFv+ave LGG+e+AtPk++lelm+vk+Ltl+hvkSHLQ+YR+ GAY57492.1 248 PRMRWTTTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRT 301 9****************************************************7 PP
2	Myb_DNA-binding	48.3	2.2e-15	249	300	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWTt ++ ++v+av++lGg+ t+k++ + m k +tl ++ks++q+y+ GAY57492.1 249 RMRWTTTLHARFVHAVELLGGHeraTPKSVLELMDvKDLTLAHVKSHLQMYR 300 89************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 419 aa Download sequence
MELFPAQPDL SLQISPPNSK PSSTWSSRRG AAAEEEMDLG FWKRALDSRN SSSMAAANAK 60 PSSDISTGGG FELSLSNPAR VSSSSVLSES LSSNNNLNHH HQFHLLQNNT TTTTNCNGNN 120 IFHSFHHQQN HSQFPTHHHL HQNQHHHPVL YHQPPQQQGL SQELGFLRPI RGIPVYQNPH 180 HHHHHHQASH AFPFPHHQQQ PLDSPPPPSL VANNNTSTSS LNSFQSQQGL MRSRFMSRFP 240 AKRSMRAPRM RWTTTLHARF VHAVELLGGH ERATPKSVLE LMDVKDLTLA HVKSHLQMYR 300 TVKTTDRAAA SSGQSDAFEN GSSGDTSEDI MFGIQHPRRP ETSSIQQQGR TSNGLWSNSS 360 SREAWLHGKT KDSAINLPSL EEVDPKCMSY EGISDVSSPN ISATSPKKPN LEFTLGRPH

Sequence ? help Back to Top

Protein Sequence Length: 419 aa Download sequence

MELFPAQPDL SLQISPPNSK PSSTWSSRRG AAAEEEMDLG FWKRALDSRN SSSMAAANAK  60
PSSDISTGGG FELSLSNPAR VSSSSVLSES LSSNNNLNHH HQFHLLQNNT TTTTNCNGNN  120
IFHSFHHQQN HSQFPTHHHL HQNQHHHPVL YHQPPQQQGL SQELGFLRPI RGIPVYQNPH  180
HHHHHHQASH AFPFPHHQQQ PLDSPPPPSL VANNNTSTSS LNSFQSQQGL MRSRFMSRFP  240
AKRSMRAPRM RWTTTLHARF VHAVELLGGH ERATPKSVLE LMDVKDLTLA HVKSHLQMYR  300
TVKTTDRAAA SSGQSDAFEN GSSGDTSEDI MFGIQHPRRP ETSSIQQQGR TSNGLWSNSS  360
SREAWLHGKT KDSAINLPSL EEVDPKCMSY EGISDVSSPN ISATSPKKPN LEFTLGRPH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G32240.1	1e-78	G2-like family protein