PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY57621.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

MYB

Protein Properties

Length: 232aa MW: 26420.7 Da PI: 8.8489

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY57621.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	53.7	4.7e-17	18	65	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg W +eEd++l+++v+ +G g+W+++++++g++R +k+c++rw +yl GAY57621.1 18 RGLWKPEEDLILKNYVETHGEGNWAAVSKKLGLKRGGKSCRLRWKNYL 65 788***************************99**********97 PP
2	Myb_DNA-binding	51.1	3e-16	71	116	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+ +++E++l+++ +k+lG++ W++Ia +++ gRt++++k++w+++l GAY57621.1 71 RGAISQQEEDLIIRMHKLLGNR-WSLIAGRLP-GRTDNEVKNYWNTHL 116 7889****************.*****.**********996 PP

Sequence ? help Back to Top
Protein Sequence Length: 232 aa Download sequence
MGNNKQVKVK RQEGKAKRGL WKPEEDLILK NYVETHGEGN WAAVSKKLGL KRGGKSCRLR 60 WKNYLRPNIK RGAISQQEED LIIRMHKLLG NRWSLIAGRL PGRTDNEVKN YWNTHLNKKC 120 RFGKRKATAV DMGTHNINGG DCRENNDDGG SNSKLPAPPM CRNSLNASQG FEEERNDYDA 180 NTWTEGDCGG SFNNYLECAL IPPNNSTFVF DDEPFIAYLD SFLVFETFEC NQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G52600.1	2e-56	MYB family protein