PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY57659.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family GATA
Protein Properties Length: 314aa    MW: 35014.3 Da    PI: 10.1608
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY57659.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA59.34.9e-19178211134
        GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34 
                 Cs C+tt+TplWR+gp+g+k+LCnaCG+++rk +
  GAY57659.1 178 CSDCNTTTTPLWRSGPRGPKSLCNACGIRQRKAR 211
                 *******************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 314 aa     Download sequence    
MTPVHLNPPH DSDPFQLAEE QKDDQHLHLL HSSSHNRAAS SSVSWTNFQD QRMIIMEESQ  60
QHDQKARVDH SGSSNLQVFS SSSIQTKKMN NITNNKLPIR KREVGEGTTS ENGSSSSGKW  120
MSSKIRLMHK MINSSSNSTA THELAVKVTQ KLQYHQLHDN SEVNSFNSSN SNNTMRACSD  180
CNTTTTPLWR SGPRGPKSLC NACGIRQRKA RRAMQAAAAV ETGTIAATGG SPFAKIKLQI  240
KDKKPRTSHV SQNKKQYRTL DPDPTHQYQS QRKLCFKDFA IALSKNSALK QVFPQDVEEA  300
AILLMELSCG FIHS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G56860.12e-15GATA family protein