PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY57677.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family MYB_related
Protein Properties Length: 305aa    MW: 32870.2 Da    PI: 10.0223
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY57677.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding40.94.8e-13122166347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +WT+eE+  ++ + ++lG g+W+ I++ + ++Rt+ q+ s+ qky
       GAY57677.1 122 PWTEEEHRVFLMGLEKLGRGDWRGISKNFVTTRTPTQVASHAQKY 166
                      8*******************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 305 aa     Download sequence    
MGRKCSHCGN TGHNSRTCSS YDNNLKGGSC STSTLAGGLR LFGVQLAISS NSSSSSSSQL  60
LPLKKSLSTD SFPAIPSPSS SASSSSSTGV TINIDQHSNK LSNGYISDSL IAPTQDRKKG  120
VPWTEEEHRV FLMGLEKLGR GDWRGISKNF VTTRTPTQVA SHAQKYFLRP KNLYKRKRRP  180
SLFDQMGRDK FSNKVLHTCC SKPGEPSNFC GLLLKSTKAS PSNGICDSSS ALAYNSLPKC  240
FNESFNFQPA ASFNLKMLTA ASASPPNLEL TLAAPTPLDQ RKVCTRDLMI EAISVISPSQ  300
LSELS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1175180KRKRRP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G56840.14e-43MYB_related family protein