PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY57680.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

TALE

Protein Properties

Length: 594aa MW: 66302.1 Da PI: 6.7926

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY57680.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	27.2	6.7e-09	513	551	18	54
HHHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 18 lFek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 +F++ ++yp+ +e+ LA+k gLt +qV++WF N R + GAY57680.1 513 MFQNflHPYPKDAEKHLLAMKSGLTRTQVSNWFINARVR 551 5887779******************************88 PP
2	BELL	84.7	1.1e-27	384	454	1	72
BELL 1 erqelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 +rq++++kka+Ll ll++Vd+rY+q+ ++++tv+s+F+a+++l++ ++++++Al++iS+ +++L+++i++qi GAY57680.1 384 QRQAVEAKKAQLLALLQMVDDRYNQCLDEIHTVVSAFHAATELDP-QVHARFALHTISFLYKNLRERISSQI 454 6899***************************************.***********************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 594 aa Download sequence
MENDMFNNPI NRASRYSILV DGTPNSLIRT SSFNFDSQKH PDPALAGFPS FSALQGEPIS 60 DIHTNLNVTN NSRVFDSDAL VTSLGRNGMR DFSVGRSGPM DNINFQEQLE DGTPISSTSF 120 ATLLAARNGL QENLNNLAIS VPSIYPVDVL RNDIANHCSN DLNSSFETSA SCGYDEVLGN 180 VNSKWVFDEA HAAPKFDGKT LLRTGFQPYS SIGSLHPSEW ISSNDADVTA NRYGSSNYSN 240 ELSLSLATYH TAITGGNNIP DQCSEVSFSG ATHRCLNATR LCSEQASCSS NELSLSFGSH 300 RPAHFLQFIS GSTYLHAVQE ILAQIASYSL ENLDDMSYLG VRKIGDNIPP SSSFITGKGR 360 PPMNSDEFPN VDGCFEVQMN PSQQRQAVEA KKAQLLALLQ MVDDRYNQCL DEIHTVVSAF 420 HAATELDPQV HARFALHTIS FLYKNLRERI SSQILAMGAH FDSKSTRGKD TVMVDSFIKE 480 QWALQQLKKK EHQIWRPQRG LPEKSVSVLR AWMFQNFLHP YPKDAEKHLL AMKSGLTRTQ 540 VSNWFINARV RLWKPMIEEM YREVNRRKAQ GSKEGIDSSR RSQISISNQR FNMN

Sequence ? help Back to Top

Protein Sequence Length: 594 aa Download sequence

MENDMFNNPI NRASRYSILV DGTPNSLIRT SSFNFDSQKH PDPALAGFPS FSALQGEPIS  60
DIHTNLNVTN NSRVFDSDAL VTSLGRNGMR DFSVGRSGPM DNINFQEQLE DGTPISSTSF  120
ATLLAARNGL QENLNNLAIS VPSIYPVDVL RNDIANHCSN DLNSSFETSA SCGYDEVLGN  180
VNSKWVFDEA HAAPKFDGKT LLRTGFQPYS SIGSLHPSEW ISSNDADVTA NRYGSSNYSN  240
ELSLSLATYH TAITGGNNIP DQCSEVSFSG ATHRCLNATR LCSEQASCSS NELSLSFGSH  300
RPAHFLQFIS GSTYLHAVQE ILAQIASYSL ENLDDMSYLG VRKIGDNIPP SSSFITGKGR  360
PPMNSDEFPN VDGCFEVQMN PSQQRQAVEA KKAQLLALLQ MVDDRYNQCL DEIHTVVSAF  420
HAATELDPQV HARFALHTIS FLYKNLRERI SSQILAMGAH FDSKSTRGKD TVMVDSFIKE  480
QWALQQLKKK EHQIWRPQRG LPEKSVSVLR AWMFQNFLHP YPKDAEKHLL AMKSGLTRTQ  540
VSNWFINARV RLWKPMIEEM YREVNRRKAQ GSKEGIDSSR RSQISISNQR FNMN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G32980.1	1e-107	TALE family protein