PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY57777.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

DBB

Protein Properties

Length: 247aa MW: 27589.7 Da PI: 7.7408

Description

DBB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY57777.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	21.6	4.4e-07	4	33	5	34
zf-B_box 5 kCpeHeekelqlfCedCqqllCedClleeH 34 C+ +e ++lfC ++ lC++C ++ H GAY57777.1 4 LCDVCEATAATLFCPADEAALCASCDVKVH 33 7****99****************999 PP
2	zf-B_box	24	7.9e-08	65	98	5	38
zf-B_box 5 kCpeHeekelqlfCedCqqllCedClleeHkgHt 38 kC++++++++ lfCe+ ++++C +C + H gH GAY57777.1 65 KCDLCDREKAFLFCEKGGMCICLTCDMVFHIGHP 98 8*****************************8896 PP

Sequence ? help Back to Top
Protein Sequence Length: 247 aa Download sequence
MQILCDVCEA TAATLFCPAD EAALCASCDV KVHELAPFYD YKEHMNNKLA SSHVRHDLPP 60 SSFGKCDLCD REKAFLFCEK GGMCICLTCD MVFHIGHPRF LVMRQKIQFP VEDPIWGKPI 120 SRPLNQAEIK KEQNDPLEMT IGGDQQNHKV FPTAVADVRA TSKAKRGNKM IDLNRKPRNP 180 KAAAPKYKNF YLFMLAEEAN DRPESITCLG MSDKQSSSSV SLTDSSNNTS IYPIASLCSC 240 NKCQQRS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38960.1	2e-32	DBB family protein