PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY57852.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

WRKY

Protein Properties

Length: 241aa MW: 27084.6 Da PI: 7.5177

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY57852.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	102.4	2.5e-32	167	225	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK vk+s +prsYYrCt+++C+vkk+ver +ed ++v++tYeg+Hnh+ GAY57852.1 167 LDDGYKWRKYGQKIVKNSLHPRSYYRCTHNNCRVKKRVERLSEDCRMVITTYEGRHNHS 225 59********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 241 aa Download sequence
MEGEKSSAGA GVGIPNYEVQ ASFTTAEAEA AAAAAAAQGM GSFVHDFDEN HEHQVLSFMG 60 APPSNSHSHY SSPISLHPLI INSRHSTENS ALGFTHTSNH DHHHQVGPLN PRAVNNENCT 120 SNHASDEGHN SWWRSSSSSE KINKVKARRK LREPRFCFQT RSDVDVLDDG YKWRKYGQKI 180 VKNSLHPRSY YRCTHNNCRV KKRVERLSED CRMVITTYEG RHNHSPCDDS NSSDHECFAH 240 F

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G44745.1	2e-65	WRKY family protein