PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY57955.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family MYB_related
Protein Properties Length: 165aa    MW: 19229.7 Da    PI: 8.4818
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY57955.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding30.39.5e-1022462348
                     -HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding 23 tWktIartmgkgRtlkqcksrwqkyl 48
                     +W+tIa++++ gRt++++k++w+++l
       GAY57955.1 22 RWSTIAARLP-GRTDNEIKNYWHSHL 46
                     5*********.************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 165 aa     Download sequence    
MFYTYSLDPL RWRVILHCKS FRWSTIAARL PGRTDNEIKN YWHSHLKKRL KQNLISAKQQ  60
CDIVQALLHS DHNSNATVHK PVCNSTHQGI QNHPQDTPNF PPKSCNESTY IASENLPGIE  120
GKYETRDFVA MGKMNYENCS NVMEFWYNIL MNSRNSIEMQ ENSGH
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
14652LKKRLKQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G31180.11e-14MYB family protein