PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY57956.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

MYB

Protein Properties

Length: 105aa MW: 12265.3 Da PI: 10.4687

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY57956.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	56.9	4.7e-18	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd++l+ ++++G g+W++ ++ g+ R++k+c++rw +yl GAY57956.1 14 KGPWTPEEDQILISFIQRYGHGNWRALPKQAGLMRCGKSCRLRWINYL 61 79********************************************97 PP
2	Myb_DNA-binding	43.7	6.4e-14	67	104	1	40
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqc 40 rg+++++E+e ++++++ lG++ W+tIa++++ gRt++++ GAY57956.1 67 RGNFSKDEEETILKLHRVLGNR-WSTIAARLP-GRTDNEI 104 89******************.*****.***98 PP

Sequence ? help Back to Top
Protein Sequence Length: 105 aa Download sequence
MVRTPCCEKM GLKKGPWTPE EDQILISFIQ RYGHGNWRAL PKQAGLMRCG KSCRLRWINY 60 LRPDIKRGNF SKDEEETILK LHRVLGNRWS TIAARLPGRT DNEII

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G23250.1	1e-64	MYB family protein