PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY57991.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family WRKY
Protein Properties Length: 183aa    MW: 20892.4 Da    PI: 9.0948
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY57991.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY1054.1e-33104162159
                 ---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
        WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                 ldDgy+WrKYGqK vk+++fprsYYrCt++gC+vkk+v+r ++d+ +v++tYeg Hnh+
  GAY57991.1 104 LDDGYRWRKYGQKAVKDNKFPRSYYRCTHEGCNVKKQVQRLTKDEGIVVTTYEGMHNHR 162
                 59********************************************************6 PP
Sequence ? help Back to Top
Protein Sequence    Length: 183 aa     Download sequence    
MENCQMFFPC SSTGKSVYPV MTTTDYIANS SDHVFSHGDQ SSSSGGFLGL KQNSGPNTDI  60
VKNDSINGAF HGSESEEKSS KMKGEKKIKK PRFAFQTRSQ VDILDDGYRW RKYGQKAVKD  120
NKFPRSYYRC THEGCNVKKQ VQRLTKDEGI VVTTYEGMHN HRIEKPTDNF EHILNQLQIY  180
TPF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G13080.13e-54WRKY family protein