PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY57998.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family TCP
Protein Properties Length: 308aa    MW: 33264.5 Da    PI: 10.3614
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY57998.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP126.72.5e-3966149285
         TCP   2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasns 85 
                 a+k+++++++hTkv+gR+RR+R++a+caar+F+L++eLG+++d++ti+WLlqqa+p+i+++tgt++++as+   a+ s+s+++  
  GAY57998.1  66 APKRSSNKDRHTKVEGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQQAEPSIIAATGTGTIPASALaAAGGSVSQQG-A 149
                 789******************************************************************99854444444433.2 PP
Sequence ? help Back to Top
Protein Sequence    Length: 308 aa     Download sequence    
MDPKASKQPS QQEVANFLNI PQQQQQQQQQ PQQLQQVNMG ENKPAEIKDF QIVIADKEEQ  60
TKKQLAPKRS SNKDRHTKVE GRGRRIRMPA LCAARIFQLT RELGHKSDGE TIQWLLQQAE  120
PSIIAATGTG TIPASALAAA GGSVSQQGAS LTAGLHQKID DLGSSRTSWG GLVGGNLVGR  180
SHQMPAAGLW PQPVSGFGFQ SSSSSGPSTG NLGTENSNYL QKMGFPGFDL PGTGTATTNM  240
GPMSFTSILG SASNQQLPGL ELGLWNYARP NIVWFGLNIL YNQNSEKMSF LVITCGRHRK  300
HFGSIPSR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G27010.17e-63TCP family protein