PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY58040.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family MYB_related
Protein Properties Length: 84aa    MW: 9455.69 Da    PI: 9.8747
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY58040.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding28.53.6e-09848648
                     HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  6 teEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                      eEd l+ ++++  G++ W+ I ++++ gRt+++  +++++ +
       GAY58040.1  8 DEEDRLICRLFAISGSR-WSVIGAHLP-GRTDNETNNYYRNTK 48
                     59***************.*********.************975 PP
Sequence ? help Back to Top
Protein Sequence    Length: 84 aa     Download sequence    
MKPWGFPDEE DRLICRLFAI SGSRWSVIGA HLPGRTDNET NNYYRNTKLK RKHEEGGLKD  60
EDMGEVGSGL GNGKVGYRGM KKKA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37780.15e-16MYB family protein