PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY58115.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

Protein Properties

Length: 953aa MW: 106118 Da PI: 6.9633

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY58115.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	46.3	7.6e-15	346	431	1	83
EEEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltledesgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFk 83 f+k+l+ sd+++ grlvlpk +ae++ +++ e++ l+++d +g++W +++++ +++s++yvl+ G ++ +L++gD+ +++ GAY58115.1 346 FEKILSASDAGRIGRLVLPKACAEAYfpHISQSEGVPLRVQDVKGKEWVFQFRFwpNNNSRMYVLE-GVTPCIQSMQLRAGDTSMIH 431 99************************777778999***********99899999999.**************98877 PP

Sequence ? help Back to Top
Protein Sequence Length: 953 aa Download sequence
MVANSVNLAL IMGPRICMNP KCRTANTHEW KKGWLLRSGV CADLCYDCGS AYENFIFCNT 60 FHLEEPGWRE CNFCSKRLHC GCRASNSFLE LLDYGGVGCR SCAMSPRLHL IQRDEIPNGF 120 GALTKKDSDD TQTPMLENRV VGDGTAEGKL TQLCRIMEAN EPSFLAPFQR GDTIVSLGQE 180 KREELRLPFG EVGTGFSSAT KLSSRSSKFT KPDGSRSMLD VRDMPESLAQ RSSSMSLGVP 240 AGCSNFVPPF SNGAADGREP CKAHPSFQQG QRSRPILPKP SKTGLTISSE TKKSTASQLR 300 IARPPAEGRG KNHLLPRYWP RITDQELQQL SGEYPFILNS TIVPLFEKIL SASDAGRIGR 360 LVLPKACAEA YFPHISQSEG VPLRVQDVKG KEWVFQFRFW PNNNSRMYVL EGVTPCIQSM 420 QLRAGDTSMI HSILTRDDKI TFSRIDPGGK LVMGFRKAPI PGDMQDAQTS AITNGCPGES 480 FLSGVTENLP TVSGYSGHFQ MLKGSKDPHI DALSEHLSLA EGDNGWHKSE NHGQKTNEDS 540 PQKSLLGMEK KRTRNIGSKS KRLLMHSEEA MELRLTWEEA QDLLRPSPSA RPNIVTIEDH 600 EFEEYDEPPV FGKRTVFTAR PSGEQEQWAQ CDDCSKWRKL PTDALLPPKW TCSDNVWDSI 660 RCSCSAAEEM IQKDLENLLR VGRESKKRKI VESQRRDQQN EPSGLDALAT AAVLGDYAGD 720 SGEPSSVGAT TTRHPRHRPG CTCIVCIQPP SGKGKHKPTC TCNVCMTVKR RFKTLMLRKK 780 RRQSEREVEV AQKNHSDQMG DSEMNGSVKQ ESVPTSHTDN EISQTKSQTE VAESSSAQIG 840 LDLNCYPNRE DMQPEESRVS IMTLDRVASV PLEDCHPNGL ASLSSCMLQQ VNNGDHERLL 900 SDESNSSYKQ FQDVERIFFC YSCAFYELFM DDVEGCANGR LHELELSVFS QAF

Sequence ? help Back to Top

Protein Sequence Length: 953 aa Download sequence

MVANSVNLAL IMGPRICMNP KCRTANTHEW KKGWLLRSGV CADLCYDCGS AYENFIFCNT  60
FHLEEPGWRE CNFCSKRLHC GCRASNSFLE LLDYGGVGCR SCAMSPRLHL IQRDEIPNGF  120
GALTKKDSDD TQTPMLENRV VGDGTAEGKL TQLCRIMEAN EPSFLAPFQR GDTIVSLGQE  180
KREELRLPFG EVGTGFSSAT KLSSRSSKFT KPDGSRSMLD VRDMPESLAQ RSSSMSLGVP  240
AGCSNFVPPF SNGAADGREP CKAHPSFQQG QRSRPILPKP SKTGLTISSE TKKSTASQLR  300
IARPPAEGRG KNHLLPRYWP RITDQELQQL SGEYPFILNS TIVPLFEKIL SASDAGRIGR  360
LVLPKACAEA YFPHISQSEG VPLRVQDVKG KEWVFQFRFW PNNNSRMYVL EGVTPCIQSM  420
QLRAGDTSMI HSILTRDDKI TFSRIDPGGK LVMGFRKAPI PGDMQDAQTS AITNGCPGES  480
FLSGVTENLP TVSGYSGHFQ MLKGSKDPHI DALSEHLSLA EGDNGWHKSE NHGQKTNEDS  540
PQKSLLGMEK KRTRNIGSKS KRLLMHSEEA MELRLTWEEA QDLLRPSPSA RPNIVTIEDH  600
EFEEYDEPPV FGKRTVFTAR PSGEQEQWAQ CDDCSKWRKL PTDALLPPKW TCSDNVWDSI  660
RCSCSAAEEM IQKDLENLLR VGRESKKRKI VESQRRDQQN EPSGLDALAT AAVLGDYAGD  720
SGEPSSVGAT TTRHPRHRPG CTCIVCIQPP SGKGKHKPTC TCNVCMTVKR RFKTLMLRKK  780
RRQSEREVEV AQKNHSDQMG DSEMNGSVKQ ESVPTSHTDN EISQTKSQTE VAESSSAQIG  840
LDLNCYPNRE DMQPEESRVS IMTLDRVASV PLEDCHPNGL ASLSSCMLQQ VNNGDHERLL  900
SDESNSSYKQ FQDVERIFFC YSCAFYELFM DDVEGCANGR LHELELSVFS QAF

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	769	780	KRRFKTLMLRKK
2	769	781	KRRFKTLMLRKKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G30470.1	0.0	B3 family protein