PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY58238.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family B3
Protein Properties Length: 180aa    MW: 20286.2 Da    PI: 9.9468
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY58238.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B348.91.2e-15271031899
                 --HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
          B3  18 lpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 
                 +p +f++++++++  + tlt++  s rsW+v+l  + ++ +++l++GW +F ++n L + +f++F++dg+++f   v++f+k
  GAY58238.1  27 IPQEFLKHISKESSDKATLTVQ-GSARSWTVTL--SETGIGVFLQDGWLKFLRDNSLGDSEFLLFTYDGNMCF--SVQIFNK 103
                 9*****7776554444444444.477*******..**************************************..9999987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 180 aa     Download sequence    
MEKKWENQGH AAPCFYHVIL DGKVPQIPQE FLKHISKESS DKATLTVQGS ARSWTVTLSE  60
TGIGVFLQDG WLKFLRDNSL GDSEFLLFTY DGNMCFSVQI FNKNGCERIV AASDQIRMNQ  120
EFVGFANGTG KDLPSQKSNK PKSMRKKKNL NCMIKSGFNV QASQTRENQD GRPKMKKPAM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G18000.11e-14B3 family protein