PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY58357.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

CPP

Protein Properties

Length: 783aa MW: 85844.2 Da PI: 5.709

Description

CPP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY58357.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCR	50.8	3.2e-16	487	525	2	40
TCR 2 ekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNke 40 ++k+CnCkkskClk+YCeCfaag++C e C+C+dC+Nk GAY58357.1 487 SCKRCNCKKSKCLKLYCECFAAGVYCIEPCSCQDCFNKP 525 689**********************************96 PP
2	TCR	50.7	3.5e-16	572	611	1	40
TCR 1 kekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNke 40 ++k+gCnCkks+ClkkYCeC++ g+ Cs +C+Ce+CkN+ GAY58357.1 572 RHKRGCNCKKSSCLKKYCECYQGGVGCSINCRCEGCKNTF 611 589***********************************85 PP

Sequence ? help Back to Top
Protein Sequence Length: 783 aa Download sequence
MDTPKKATQM ATPLSKFEDS PVFNYINSLS PIKPVKSLPV TQTFNSLNFS SPPSIFTSPH 60 ISAHKETRFL RRNNCLGLSK PEFSSENGNK ICRNDGVAND ASQLYDNSAE LQENFDPRVS 120 MEEVSVEASN DSKFAIELPQ ALKYDCGSPG CDPNPCNIES NCMTEMASTS VSVVQFVQEA 180 SENGASEADV RLQRTCQMEQ KNEVTGCEWE SLISDAADLL IFNLPNDSED FKGLMQKSLD 240 SGGRYASVTP RYINGEPIME MIDPVGTDHQ NGMEHQSTQP GETSILNDDL DECFTGDPSE 300 NGVTAMGMSN PASCKPISNL HRGMLRRCLD FELVTRRKNA DGSSNYGSSV ILHSDEKFAS 360 EDKQLVPLKP GSDSPRCMVP GIGLHLNALA ITPQENKNIG IESLSSVRQL SLPGANASFH 420 SPENCEDPHH EPLTSASTER DIVAVENGVL LAEDASQTSA YLAEEEYNQN SPKKKRRRME 480 NAGENESCKR CNCKKSKCLK LYCECFAAGV YCIEPCSCQD CFNKPIHEDT VLATRKQIES 540 RNPLAFAPKV IRSSDSLPEV GEDTSKTPAS ARHKRGCNCK KSSCLKKYCE CYQGGVGCSI 600 NCRCEGCKNT FGRKDGSSST DPEAEPEDEE MEMCEKSGVD KRFQKTEFLS NEEQNPGSAL 660 PTTPLRLSRP LVQLPFSTKC KPPRSLLSIG SSSGFFTGHN YGKPNILRSQ PKFEKSLQTA 720 PEDEMPEILR GNCTPCSGIK TSSPNSKRVS PPHTILGSSP SRRSGRKLIL QSIPSFPSLT 780 PKH

Sequence ? help Back to Top

Protein Sequence Length: 783 aa Download sequence

MDTPKKATQM ATPLSKFEDS PVFNYINSLS PIKPVKSLPV TQTFNSLNFS SPPSIFTSPH  60
ISAHKETRFL RRNNCLGLSK PEFSSENGNK ICRNDGVAND ASQLYDNSAE LQENFDPRVS  120
MEEVSVEASN DSKFAIELPQ ALKYDCGSPG CDPNPCNIES NCMTEMASTS VSVVQFVQEA  180
SENGASEADV RLQRTCQMEQ KNEVTGCEWE SLISDAADLL IFNLPNDSED FKGLMQKSLD  240
SGGRYASVTP RYINGEPIME MIDPVGTDHQ NGMEHQSTQP GETSILNDDL DECFTGDPSE  300
NGVTAMGMSN PASCKPISNL HRGMLRRCLD FELVTRRKNA DGSSNYGSSV ILHSDEKFAS  360
EDKQLVPLKP GSDSPRCMVP GIGLHLNALA ITPQENKNIG IESLSSVRQL SLPGANASFH  420
SPENCEDPHH EPLTSASTER DIVAVENGVL LAEDASQTSA YLAEEEYNQN SPKKKRRRME  480
NAGENESCKR CNCKKSKCLK LYCECFAAGV YCIEPCSCQD CFNKPIHEDT VLATRKQIES  540
RNPLAFAPKV IRSSDSLPEV GEDTSKTPAS ARHKRGCNCK KSSCLKKYCE CYQGGVGCSI  600
NCRCEGCKNT FGRKDGSSST DPEAEPEDEE MEMCEKSGVD KRFQKTEFLS NEEQNPGSAL  660
PTTPLRLSRP LVQLPFSTKC KPPRSLLSIG SSSGFFTGHN YGKPNILRSQ PKFEKSLQTA  720
PEDEMPEILR GNCTPCSGIK TSSPNSKRVS PPHTILGSSP SRRSGRKLIL QSIPSFPSLT  780
PKH

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	473	478	KKKRRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G14770.1	1e-147	CPP family protein