PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY58371.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family SBP
Protein Properties Length: 190aa    MW: 21183.7 Da    PI: 8.8691
Description SBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY58371.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SBP1382.7e-4366142278
                 -SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS
         SBP   2 CqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 
                 Cqv++C+adls+ak+yhrrhkvCevh+ka+vvl+ g++qrfCqqCsrfhelsefDe+krsCrrrLa+hnerrrk++a
  GAY58371.1  66 CQVDKCAADLSDAKQYHRRHKVCEVHAKAQVVLMGGIRQRFCQQCSRFHELSEFDETKRSCRRRLAGHNERRRKNAA 142
                 **************************************************************************975 PP
Sequence ? help Back to Top
Protein Sequence    Length: 190 aa     Download sequence    
MDAKRKNKMV KVLKKEEATA AFVDSDDDDD DGGEYDLCPQ EEGDDNRNSG SKKKKGSSGG  60
SGLRSCQVDK CAADLSDAKQ YHRRHKVCEV HAKAQVVLMG GIRQRFCQQC SRFHELSEFD  120
ETKRSCRRRL AGHNERRRKN AAESNGEGSS CKGTGTGTQL KDLVCGKLDD KGRIKISIQE  180
NATCKHFQIR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G53160.17e-45SBP family protein