PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY58472.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family bHLH
Protein Properties Length: 254aa    MW: 28724 Da    PI: 6.588
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY58472.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH26.51.1e-08142182954
                 HHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
         HLH   9 ErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                  r RR+ri +++  L++l+P       +K++ a++L +A++Y+k L
  GAY58472.1 142 ARHRRERISEKIRILQRLVPGG-----TKMDTASMLDEAIRYVKFL 182
                 699*****************87.....8****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 254 aa     Download sequence    
MDMNQNKLIN HSWDVEMAME DHQIFHHDPS AFSSSSSPSL WPSFNNFPLQ TNTQILPSSS  60
RHIIQPSSST LLFGDHNNNN NNNNNNIIDQ EEDEEPEEEL GAMKEMMYRI AAMQPVDIDP  120
TTIRKPKRRN IRISDDPQSV AARHRRERIS EKIRILQRLV PGGTKMDTAS MLDEAIRYVK  180
FLKRQIRLLQ SNQCNIVGDD HYNKLSLGAT TNTTIATTTA SASAAGALDP ILGHSLPFNG  240
NRNSSFYFNH HEVG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00120.13e-47bHLH family protein