PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY58655.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

WRKY

Protein Properties

Length: 82aa MW: 9630.87 Da PI: 9.7181

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY58655.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	23.4	2e-07	12	78	21	88
FAR1 21 kskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHe 88 ++k + e+++ f+ k+gk++ +++ + r+ + + gC+ k +v++++ d+ +++t+ e HnHe GAY58655.1 12 RTKSELEVMDDGFKWRKYGKKSVKNSP--NPRNYYKCSTGGCQVKKRVERDReDSSYVITTYEGTHNHE 78 5567788999999999*99998877..88999999999******9999************7 PP
2	WRKY	100.1	1.4e-31	20	78	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 +dDg++WrKYG+K+vk+s++pr+YY+C++ gC+vkk+ver++ed ++v++tYeg+Hnhe GAY58655.1 20 MDDGFKWRKYGKKSVKNSPNPRNYYKCSTGGCQVKKRVERDREDSSYVITTYEGTHNHE 78 69********************************************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 82 aa Download sequence
MKMEVGQRFA FRTKSELEVM DDGFKWRKYG KKSVKNSPNP RNYYKCSTGG CQVKKRVERD 60 REDSSYVITT YEGTHNHESP CV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G26170.1	9e-41	WRKY family protein