PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY58923.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family Trihelix
Protein Properties Length: 121aa    MW: 13849.7 Da    PI: 8.6533
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY58923.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix35.42.8e-111987270
    trihelix  2 WtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekk 70
                W+ +e l L +    +e +  ++ +  ++W+ +s+ + +  + r+++qC+ kw++l  +ykki  +++ 
  GAY58923.1 19 WSSKEALILGNEIAAVEADCLKALSSYQKWKIISETCTALDVPRTANQCRRKWDSLIDEYKKIIVRSRT 87
                777777777777778888888888999***********************************9776665 PP
Sequence ? help Back to Top
Protein Sequence    Length: 121 aa     Download sequence    
MEGGSSRTRH TRSQVGPDWS SKEALILGNE IAAVEADCLK ALSSYQKWKI ISETCTALDV  60
PRTANQCRRK WDSLIDEYKK IIVRSRTFPK SQTQAHTDCF PPNFDRELFK AIHDFVMSKD  120
N
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G31270.14e-37Trihelix family protein