PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY58972.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family WOX
Protein Properties Length: 336aa    MW: 38611.4 Da    PI: 7.1379
Description WOX family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY58972.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox70.42.2e-2288147357
                 --SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
    Homeobox   3 kRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 
                 +R+++t+eql +Lee++++ +r+psae+++++A++l    +++ ++V++WFqN++a+e++
  GAY58972.1  88 SRWNPTPEQLLALEEMYRRgTRTPSAEQIQHIASQLrrfgKIEGKNVFYWFQNHKARERQ 147
                 7*****************99**************************************97 PP
2Wus_type_Homeobox1123.2e-3687149365
  Wus_type_Homeobox   3 rtRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 
                        ++RW+PtpeQ+  Lee+y++G+rtP++e+iq+i+++L+++Gkie+kNVfyWFQN+kaRerqk+
         GAY58972.1  87 SSRWNPTPEQLLALEEMYRRGTRTPSAEQIQHIASQLRRFGKIEGKNVFYWFQNHKARERQKR 149
                        68***********************************************************95 PP
Sequence ? help Back to Top
Protein Sequence    Length: 336 aa     Download sequence    
MSVTRDNQLN SIPADHNSSS GTVTRPLIQN PNAAFSPKNT NISEVPSYYD FTSENTNLLP  60
LNHHLADIAP DHAKSRVSEF NEQPLGSSRW NPTPEQLLAL EEMYRRGTRT PSAEQIQHIA  120
SQLRRFGKIE GKNVFYWFQN HKARERQKRR RRESETNNSH QQKPHNTNHN IPGDKKDSGL  180
RRTSYDLGQT KNWAPSSYSE EFVSIYRAEN TSCGPQYGWT QFDGRELQQG KSSTNITEAA  240
EFMNATWHKM EYKKLLKTDD QNLSGFSLLD MKPYQQENEE TKTLELFPLH RDDDDDGNSV  300
NATKKDNNKV PITAINDTNN FTPSTSQYIE FLPLKN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18010.16e-29WOX family protein