PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY59002.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family B3
Protein Properties Length: 230aa    MW: 26603.4 Da    PI: 10.2981
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY59002.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B360.82.3e-19140226195
                 EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS
          B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 
                 f+k +++s+v +  +l lp++f++++  +k + ++++lede+gr++e  +i +kk+    l++GW+ F+  ++L++gD +vF+l+++++f  +v+
  GAY59002.1 140 FIKSMVRSHVYSCFWLGLPNQFCKQNL-PK-TVTEMVLEDENGREFEAVYIGQKKG----LSGGWRAFALHHKLDDGDALVFELVEQKRF--KVR 226
                 89*********************9994.33.3459***************655555....9***********************988888..444 PP
Sequence ? help Back to Top
Protein Sequence    Length: 230 aa     Download sequence    
MAKTNTYEEA RKKRLEENSQ RLQELGIEKI SKTLSQLSKS VKKSPQAQRH LPKFKSESVI  60
SIVEPRRSSR ARNSVVSYRD DLDIDLHPLR KRSRSNSSSW ASYLARPLEE VKMASYEERA  120
RALKSAEQLQ SSLQSGYPSF IKSMVRSHVY SCFWLGLPNQ FCKQNLPKTV TEMVLEDENG  180
REFEAVYIGQ KKGLSGGWRA FALHHKLDDG DALVFELVEQ KRFKVRFIYL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G58280.11e-56B3 family protein