PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY59089.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family C2H2
Protein Properties Length: 210aa    MW: 23592.6 Da    PI: 9.554
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY59089.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H214.98e-055678123
                EEETTTTEEESSHHHHHHHHHHT CS
     zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                y+C+ C + F++   L  H+++H
  GAY59089.1 56 YSCSFCRREFKSAQALGGHMNVH 78
                99*******************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 210 aa     Download sequence    
MEAQAQYWMW MKRQRDQILK YSFSDSSSSS SWEEKAFAED AAARSLGGCI WPPRSYSCSF  60
CRREFKSAQA LGGHMNVHRR DRARLKNSLN KSTHHKCPSD HSSPSNNVVV VASSPTLLNT  120
RVTAALLTTA KENSSSFVTI NHEDDFVETN LSVGLKPDIW CDKTISCKRA KTSAAVSKST  180
QPFFMSSDKF SLQKENLDLE LRLGDPSKMK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06070.14e-33C2H2 family protein