PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY59154.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family YABBY
Protein Properties Length: 176aa    MW: 19643.4 Da    PI: 9.3138
Description YABBY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY59154.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1YABBY192.52e-591214922170
       YABBY  22 lavsvPstslfkvvtvrCGhCtsllsvnlakasqllaaeshldeslkeelleelkveeenlksnvekeesastsvsseklsenedeevprvppvirPPe 120
                 l vsvP +slf++vtvrCGhC++ll vn+  a q+++ ++        +l++++ + e+++++ +  ++s+ ++ ss    e  ++e+pr+pp irPPe
  GAY59154.1  12 LGVSVPCSSLFNIVTVRCGHCANLLNVNMVSALQAVPLQDP-------QLQKQHINLEDSITK-DCGSSSKCNKFSSA--FETAEHETPRMPP-IRPPE 99 
                 77***************************999999999985.......332222222222222.22233333333332..35678999**999.9**** PP

       YABBY 121 krqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahfPkihfgl 170
                 krqrvPsaynrfikeeiqrikasnPdishreafs+aaknWahfP+ihfgl
  GAY59154.1 100 KRQRVPSAYNRFIKEEIQRIKASNPDISHREAFSTAAKNWAHFPHIHFGL 149
                 ************************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 176 aa     Download sequence    
MATNVLVFLF FLGVSVPCSS LFNIVTVRCG HCANLLNVNM VSALQAVPLQ DPQLQKQHIN  60
LEDSITKDCG SSSKCNKFSS AFETAEHETP RMPPIRPPEK RQRVPSAYNR FIKEEIQRIK  120
ASNPDISHRE AFSTAAKNWA HFPHIHFGLK LDGNKQAKLD KAAAYAEGTQ KSNGFY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G08465.18e-68YABBY family protein