PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY59195.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family ERF
Protein Properties Length: 336aa    MW: 36934.6 Da    PI: 9.3369
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY59195.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP262.77.7e-20100149255
         AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                 +y+GVr+++ +g+W+AeIrdp   + + +r++lg+f tae Aa+a++aa+++++g
  GAY59195.1 100 HYRGVRQRP-WGKWAAEIRDP---N-KaARVWLGTFETAEAAAAAYDAAALRFKG 149
                 7********.**********9...3.35***********************9987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 336 aa     Download sequence    
MKTLQATLVF ASLARINKVD RRHGKRPLPF DVSEEKKEDE ISSSVNQSSH QAQVLDSSAA  60
TVPPGSAVHV TATSAGYRPS HGQNTSQHTQ DQGNILRRRH YRGVRQRPWG KWAAEIRDPN  120
KAARVWLGTF ETAEAAAAAY DAAALRFKGS KAKLNFPERV QAPPDLHHLG YINIAASSKN  180
NNNSPTVISQ QPQSVIINNP LPQVPSPPAL SHHHMMPHYS PSYDHHQTFP NLFQYAQLLS  240
SNNIDNAVNQ YAAPALYYGQ DYPPLMFPSS SSSSPSSSSS MSQTYHQNQL EQELFRLSSS  300
SSSQVGNFSS AAASNTTTTT ALDEQERNSS DNNQKE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G61890.18e-33ERF family protein