PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY59227.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family B3
Protein Properties Length: 290aa    MW: 32763.7 Da    PI: 9.9154
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY59227.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B365.39.1e-21112209195
                 EEEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEETTS.-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EE CS
          B3   1 ffkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltledesg.rsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvv 94 
                 f+k+l++sdv++++r++lpkk ae+h   ++++e++ +++ed++g  +W++k+++  +++s++yvl+ ++ +Fv+a+gL+ gDf++ + d ++++++v+
  GAY59227.1 112 FQKELKNSDVSSLRRMILPKKAAEAHlpVLESKEGIFISMEDLDGlHVWTFKYRFwpNNNSRMYVLE-NTGDFVNAHGLQLGDFIIVYQD-DQNQNYVI 208
                 99**************************555668899********9*******9989999999***9.******************9943.36666666 PP

                 E CS
          B3  95 k 95 
                 +
  GAY59227.1 209 Q 209
                 6 PP
Sequence ? help Back to Top
Protein Sequence    Length: 290 aa     Download sequence    
MMMDQGVVVH EKNEARAFMA GVEGVTAKGD KSTRFGSDPI RASGSTLDLV AAVTSALGAN  60
INRKKRMARQ RRSSSFNLLT FSSPSSSSTS HVSPPLALPA REIDPGRLRF LFQKELKNSD  120
VSSLRRMILP KKAAEAHLPV LESKEGIFIS MEDLDGLHVW TFKYRFWPNN NSRMYVLENT  180
GDFVNAHGLQ LGDFIIVYQD DQNQNYVIQA KKASDQDKPT QQWEQLYCFG PEALLPFLLY  240
VKSINVIKGS KWETCNIFID PLLFILNITV IGIYARKMLS IKKNERITRE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G26790.16e-74B3 family protein