PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY59391.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family Nin-like
Protein Properties Length: 333aa    MW: 38401.4 Da    PI: 9.7745
Description Nin-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY59391.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1RWP-RK79.82.8e-25204253352
      RWP-RK   3 keisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 
                 ++i+ledl kyF+lpi +A+  L+v+lTvLK++CR++GI+RWPhRkiksl
  GAY59391.1 204 AKIDLEDLVKYFDLPILEASTRLNVGLTVLKKKCREFGIPRWPHRKIKSL 253
                 689*********************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 333 aa     Download sequence    
MDPTQQQHFI KALFVFENTM NRELVRSLHV YGLNDGKEKQ VEREFLFKER GSYVEMQATP  60
ILKLRGFQVS ELFQGRAIGL WLCIFAFGAQ SSLAFVDIPP KLLISRNPKL KSIPKLANDL  120
QMIFQLSCGT ENQELLQSTL KEMCEMSRSH CYRSRRTPQV FHQDLNCVPY SVSTCEYSGS  180
QQIEQCGPGT MDKKKKRATS EDVAKIDLED LVKYFDLPIL EASTRLNVGL TVLKKKCREF  240
GIPRWPHRKI KSLDGLIHEL QEVDHQQPGG EAVGTAVAKR RQMLEEEKET IGRRPFVEIQ  300
RETKKFRQDI FKRRHKAKAL KIQTSQSPSS QQL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G35590.19e-86Nin-like family protein