PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY59529.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family ERF
Protein Properties Length: 186aa    MW: 20368.6 Da    PI: 4.7718
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY59529.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP256.28.7e-181565155
         AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                s y+GVr +k +g+Wv+eIr+p   g + r++lg+f tae Aa+a++ a++ ++g
  GAY59529.1 15 SSYRGVRKRK-WGKWVSEIREP---GTKSRIWLGSFETAERAAAAYDVAALHFRG 65
                67*****999.**********8...325***********************9998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 186 aa     Download sequence    
MDAKSLNSFH GGTSSSYRGV RKRKWGKWVS EIREPGTKSR IWLGSFETAE RAAAAYDVAA  60
LHFRGREARL NFPELVTSLP KPASSNAEDI RMAAHEAALR LGNTSAGSTS EEAGGGSTSG  120
GSSLGPVTVR LSPSQIQAIN DSTMDSPKMW MDQMAEELML EQNMMFSNEF EGDEWNDMQS  180
DSLWDP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G71450.11e-55ERF family protein