PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY59598.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family M-type_MADS
Protein Properties Length: 321aa    MW: 36906.4 Da    PI: 9.766
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY59598.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF421.2e-131051243
                ---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TT CS
      SRF-TF  2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsst 43
                 i+ +  r +t+ kR+ g+ KKA+E  +LC++  +vii++++
  GAY59598.1 10 LIDKEKPRMITYQKRKRGLKKKAQEFATLCGVPTCVIIYGPR 51
                5788889*********************************86 PP
Sequence ? help Back to Top
Protein Sequence    Length: 321 aa     Download sequence    
MGRGKLTLKL IDKEKPRMIT YQKRKRGLKK KAQEFATLCG VPTCVIIYGP RLNSHPGSVD  60
VEVWPKDHKE FMQVVNLYRD KAFTSVRGVK SQNLYDFFAD RNRKVYEKIV KIRKANFESK  120
FSSDLDEDFN NFSMHQLKGM LVVLDNNIDV ATRKLALIKG HLQNFGCYND NNNANNSAQV  180
LFQQPQPLAS HHVNMQLASY HHHEPIQMVS FDFNPVDNPT MMMMLMNGGD QIQLGCNTTA  240
LYNHHHPMQH AVYCDPVGAM IENRVMMNNP RAAMRFVGST RQQFQPFIEQ FPVLPSPQFN  300
GFYGDMGFFA REKSCRYGAG R
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G58890.13e-24M-type_MADS family protein