PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY59855.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family E2F/DP
Protein Properties Length: 351aa    MW: 38427.9 Da    PI: 6.5303
Description E2F/DP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY59855.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1E2F_TDP87.21.2e-2796178271
     E2F_TDP   2 keksLrlltqkflklleksee.givtlnevakeLvse................dvknkrRRiYDilNVLealnliekkekneirwkg 71 
                 ++++Lr++++k   ++ek+e+ g++t+neva+eLv+e                d+kn+rRR+YD+lNVL+a+++i+k +k+ei+wkg
  GAY59855.1  96 SGRGLRQFSMK---VCEKVESkGRTTYNEVADELVAEfadpsnslatpdqqqyDEKNIRRRVYDALNVLMAMDIISK-DKKEIQWKG 178
                 689********...*****999*******************************************************.*******98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 351 aa     Download sequence    
MVTGNNSHQE DGDRQQPAAK GGGATRSWGT TVSGQSVSTS GSVGSPSQSM ATPASDSTFL  60
RLNHLDIHGD DAGSQGAVVG GKKKKRGQRA GGGDKSGRGL RQFSMKVCEK VESKGRTTYN  120
EVADELVAEF ADPSNSLATP DQQQYDEKNI RRRVYDALNV LMAMDIISKD KKEIQWKGLP  180
RTSLNDIEEL KAERLGLRNR IEKKTAYLQE LEDQFVGLQN LIQRNERLYS SGNAPSGGVA  240
LPFILVQTRP HATVEVEISE DMQLVHFDFN STPFKLHDDN SVLKAMKFCE RQQSDDMAQS  300
FPADDGEGSS MAGVYQPPQL LPPPRANNPN RPPTSPPVPV EDILAAKRFM N
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G03415.11e-137E2F/DP family protein