PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY60048.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

CPP

Protein Properties

Length: 798aa MW: 88181.2 Da PI: 5.1103

Description

CPP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY60048.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCR	52.5	9.8e-17	543	581	1	39
TCR 1 kekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNk 39 ++k+gCnCkkskClkkYCeCf+a++ Cs+ C+Ce+C+N+ GAY60048.1 543 RHKRGCNCKKSKCLKKYCECFQANVGCSDGCRCEGCSNS 581 589***********************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 798 aa Download sequence
MESPEGDRIK ATSLSTPGSS PAVQESPVFN FISNLSPINS VKAARYTQRF FETQFPTPPP 60 VFRTPRLDLQ RETSFLKSND ADAASRGYGD CGNRMSTVLV PCIQKELQSC SPSGCVDDYL 120 TDPVEVEGCS NSNELCVQPA KNVSKLSSSG FNSPTITSPK VNGANDRNSE DFMHMLPDQA 180 EEDPLRSLAL FETAIEQRDA ESFDGSHKLT PTEKADQNVM LQNTGTQHNG QDGSSQSPKN 240 LQNVEADKNS SENVGPVSTG LLKSWSRIIH RRIIEYDSKI SHSSHNVTQE SDNSTLPASF 300 RDWESLIPSD IESREVSSGR EATSSSQNVA SRLSFCQSEF VRSSQNEESL PLIGPLPPGF 360 SLHLSSMAEL MPISSDLMPT GRIHDYMKND QQDDQAVVGA SLVISQSTDS MKQISDSLQM 420 TLSEQQAAPC EGMMLTSEIE ELNQVNKSII SDGEIFRVQH DLIEAFFSSF NVDPVSNAGI 480 YCIDSCACES CFNKPEFEET VTDTRQQIQS RNPLAFAPKI VGHADSAANV VEDGNLTTPA 540 SARHKRGCNC KKSKCLKKYC ECFQANVGCS DGCRCEGCSN SFGRKTESKY QKVQRWENQS 600 HVKLDAAANV TDSTKTRTIK PFSARWEDLP DMSHLTPLSY SYPEAEASSV SPSMRDFQNV 660 RRAHLHQESS FQSSVNPHWQ SPMSSMPQFH EDFAEHNRRS SYSKVHDTTK EDNMPEIQKD 720 TSTPSNASKA DVPNRKQISP PQFQSQELRS SSTQGGLESD RKFSWKNVPS FPPLTPYSKS 780 KDDIGQTGSD FKGHPNDN

Sequence ? help Back to Top

Protein Sequence Length: 798 aa Download sequence

MESPEGDRIK ATSLSTPGSS PAVQESPVFN FISNLSPINS VKAARYTQRF FETQFPTPPP  60
VFRTPRLDLQ RETSFLKSND ADAASRGYGD CGNRMSTVLV PCIQKELQSC SPSGCVDDYL  120
TDPVEVEGCS NSNELCVQPA KNVSKLSSSG FNSPTITSPK VNGANDRNSE DFMHMLPDQA  180
EEDPLRSLAL FETAIEQRDA ESFDGSHKLT PTEKADQNVM LQNTGTQHNG QDGSSQSPKN  240
LQNVEADKNS SENVGPVSTG LLKSWSRIIH RRIIEYDSKI SHSSHNVTQE SDNSTLPASF  300
RDWESLIPSD IESREVSSGR EATSSSQNVA SRLSFCQSEF VRSSQNEESL PLIGPLPPGF  360
SLHLSSMAEL MPISSDLMPT GRIHDYMKND QQDDQAVVGA SLVISQSTDS MKQISDSLQM  420
TLSEQQAAPC EGMMLTSEIE ELNQVNKSII SDGEIFRVQH DLIEAFFSSF NVDPVSNAGI  480
YCIDSCACES CFNKPEFEET VTDTRQQIQS RNPLAFAPKI VGHADSAANV VEDGNLTTPA  540
SARHKRGCNC KKSKCLKKYC ECFQANVGCS DGCRCEGCSN SFGRKTESKY QKVQRWENQS  600
HVKLDAAANV TDSTKTRTIK PFSARWEDLP DMSHLTPLSY SYPEAEASSV SPSMRDFQNV  660
RRAHLHQESS FQSSVNPHWQ SPMSSMPQFH EDFAEHNRRS SYSKVHDTTK EDNMPEIQKD  720
TSTPSNASKA DVPNRKQISP PQFQSQELRS SSTQGGLESD RKFSWKNVPS FPPLTPYSKS  780
KDDIGQTGSD FKGHPNDN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G22780.1	4e-49	CPP family protein