PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY60268.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family ERF
Protein Properties Length: 216aa    MW: 24605 Da    PI: 8.4701
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY60268.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP256.28.4e-18126176255
         AP2   2 gykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkkleg 55 
                 +y+GVr+++ +g+++AeIrdp     k  r++lg+f++  +Aaka++ a+ +++g
  GAY60268.1 126 HYRGVRRRP-WGKYAAEIRDP---ArKGSRVWLGTFDSDVDAAKAYDSAAFRMRG 176
                 8********.**********8...4445**********99*************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 216 aa     Download sequence    
MSHKNPSPCP VLLLYKLTQL TRSLHFSSIL INMSNMTTLE EESSILEFIR QFLLGDFTSL  60
DDPNLSFLQP MESEFPVIKS EPDSPTFCEI IKPEPLDITC LGSSNWTESP QKRSEPKLAD  120
TEERKHYRGV RRRPWGKYAA EIRDPARKGS RVWLGTFDSD VDAAKAYDSA AFRMRGRKAI  180
LNFPLEAGAD SPPAKNSRKR RREKTLDLQE STISII
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1198202RKRRR
2198204RKRRREK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G07580.16e-44ERF family protein