PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY60413.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

LBD

Protein Properties

Length: 113aa MW: 13291.2 Da PI: 6.2285

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY60413.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	29.7	1.8e-09	35	64	61	90
DUF260 61 lvyeAearardPvyGavgvilklqqqleql 90 + yeA+ r+rdPvyG+vg + +lq+q ++l GAY60413.1 35 MDYEANSRIRDPVYGCVGAVCHLQKQQQNL 64 56************************9987 PP

Sequence ? help Back to Top
Protein Sequence Length: 113 aa Download sequence
MSYFLKLLES FRELQSWVNL ATGACRTKRD CKLIMDYEAN SRIRDPVYGC VGAVCHLQKQ 60 QQNLIALIFM EMAQSQEQVL HRHQQQQPQQ QFIDTSCFLD EYSLGSTWEP LWT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G07900.1	4e-09	LBD family protein