PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY60502.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family ERF
Protein Properties Length: 187aa    MW: 20430.8 Da    PI: 5.1031
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY60502.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2544.2e-173483255
         AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                 ++GVr ++ +g++v+eIr p e   ++r++lg+fg+ae+Aa+a++ a+ +l+g
  GAY60502.1 34 PFRGVRKRR-WGSYVSEIRLPGE---KTRIWLGSFGSAEKAARAYDSAAFYLKG 83
                69****887.**********944...5************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 187 aa     Download sequence    
MSVTTQTQEP SQLQPGSSTS KPGSKKRTRQ NDTPFRGVRK RRWGSYVSEI RLPGEKTRIW  60
LGSFGSAEKA ARAYDSAAFY LKGNLATLNF PASAGALPRP ESCSRKDIQV AAAKAAALVE  120
MGDRIESECS GSGGEPDCGD WWERETTASD EVKVAPLLSP PRFDSDIGEL YCWMDDDNFL  180
LGSCLEL
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
12542KKRTRQNDTPFRGVRKRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G60490.13e-28ERF family protein