PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY60532.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family NF-YB
Protein Properties Length: 168aa    MW: 18490 Da    PI: 4.382
Description NF-YB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY60532.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YB681.7e-21331051385
       NF-YB  13 vsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkv 85 
                 +++i+k++lPa+ ++++da++++ ec +efi +v+se+++ c re+++ti+++ +l al  lGf +y+e++ +
  GAY60532.1  33 MTKIIKEMLPADVRVARDAQDLLIECCVEFINLVSSESNEVCSREDKRTIAPEHVLKALEVLGFGEYIEEVYA 105
                 789******************************************************************9865 PP
Sequence ? help Back to Top
Protein Sequence    Length: 168 aa     Download sequence    
MEPMDIVGKS KEDASLPKAI ESKVLLGCLN STMTKIIKEM LPADVRVARD AQDLLIECCV  60
EFINLVSSES NEVCSREDKR TIAPEHVLKA LEVLGFGEYI EEVYAAYEQH KLETMDSLKG  120
GKWSNGAEMT EEEAAAEQQR MFAEARARMN GGAAGPPKQP DINPSLES
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G23090.48e-71NF-YB family protein