PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY60537.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family ERF
Protein Properties Length: 216aa    MW: 24060.9 Da    PI: 10.2251
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY60537.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP251.91.9e-164292155
         AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                s++ GVr+++ +grWvAeI++ s   ++ r +lg+f+ aeeAa a++ a++ l+g
  GAY60537.1 42 SRFLGVRQRP-SGRWVAEIKESS---QKLRLWLGTFDKAEEAAMAYDIAARLLRG 92
                6788******.7******99932...36***********************9998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 216 aa     Download sequence    
MDTKKSSKLP PYKSRNPYKN QTLVSLQTNN NNLHENGNRS KSRFLGVRQR PSGRWVAEIK  60
ESSQKLRLWL GTFDKAEEAA MAYDIAARLL RGRNAKTNFI HHGIINFHEE INYSLLGKNP  120
RLHQLLQQAA VTKSHAISSS SKFLNNNMAN RDDESINFDT LVEETIFCSS TSTADCSVKS  180
HGNFDNGLSF GSSKVYSSVV VAPSFSASLC QGSSRT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G19790.12e-19ERF family protein