PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY60713.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family MYB_related
Protein Properties Length: 97aa    MW: 11656.4 Da    PI: 10.1741
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY60713.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding361.6e-111462148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmg.kgRtlkqcksrwqkyl 48
                     +g+W++eEd++l  ++ ++G  +W+ I++  g   +  k+c++rw +yl
       GAY60713.1 14 KGAWSKEEDDKLRAYILKYGHWNWREIPKFAGkSVKVWKSCRLRWMNYL 62
                     79******************99**********8335669********97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 97 aa     Download sequence    
MVRAPTYDEN GMKKGAWSKE EDDKLRAYIL KYGHWNWREI PKFAGKSVKV WKSCRLRWMN  60
YLRPDIKHGS YTKEEEDTII RLRQQHGNNF LKIDLAA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G12820.11e-33MYB family protein