PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY60714.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

MYB

Protein Properties

Length: 261aa MW: 29779.3 Da PI: 6.7869

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY60714.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	51.3	2.7e-16	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g WT+eEd +l+ +v+++G +W+ +++ g+ R++k+c++rw +yl GAY60714.1 14 KGTWTPEEDRKLIAYVTKYGYWNWRQLPKYAGLARCGKSCRLRWMNYL 61 799*******************************************97 PP
2	Myb_DNA-binding	53.2	6.7e-17	67	110	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg+ T+eE++ ++++++ lG++ W++Ia+ ++ gRt++++k++w++ GAY60714.1 67 RGNYTKEEEDTIIRLHESLGNR-WSAIAAQLP-GRTDNEIKNHWHT 110 899*****************.*****.*********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 261 aa Download sequence
MVRTPCCDKT GLKKGTWTPE EDRKLIAYVT KYGYWNWRQL PKYAGLARCG KSCRLRWMNY 60 LRPNIKRGNY TKEEEDTIIR LHESLGNRWS AIAAQLPGRT DNEIKNHWHT SLKKRLKRNS 120 ITNANGAKDT PKRKDPEIYN HDDTEANPVQ ESNLVDIIPP ILESSSSSSD QISSLSMTTD 180 ITSVGKNTNT TDELILDNNN EAVFHPYADT SGSFWTEPFY SDNFYNLYIS NDFQAPSLLP 240 ADPGFASVHS PFLDGEIILW P

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G23250.1	2e-69	MYB family protein