PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY60920.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

TCP

Protein Properties

Length: 213aa MW: 22631.3 Da PI: 10.5936

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY60920.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	113.1	3.7e-35	43	122	6	66
TCP 6 drhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt...................s 66 ++++++hTkv+gR+RRvR++ +caar+F+L++eLG+ +d++tieWLl+qa+p+i+++tgt s GAY60920.1 43 SSTKDRHTKVNGRGRRVRMPPLCAARIFQLTRELGHRSDGETIEWLLRQAEPSIIAATGTgtvpavavssstagptpmsS 122 689*********************************************************44444433333333333322 PP

Sequence ? help Back to Top
Protein Sequence Length: 213 aa Download sequence
MASEMALQTH QNPNPNSVTP TTTESAAKTE LAHPRKRSGS SSSSTKDRHT KVNGRGRRVR 60 MPPLCAARIF QLTRELGHRS DGETIEWLLR QAEPSIIAAT GTGTVPAVAV SSSTAGPTPM 120 SSSPPSLSCC VQPLSVSSQG MFLAACAGRQ PNLPFSTCAS RWGCSSREMG TATYRSQRCY 180 CSRQLRAAGR RGGGGGREWG ARGYQGDWGS SLD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G47620.1	6e-29	TCP family protein