PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY61118.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

MYB_related

Protein Properties

Length: 798aa MW: 88446.1 Da PI: 4.8958

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY61118.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	23.9	9.7e-08	735	790	1	47
TSSS-HHHHHHHHHHHHHTTTT.....-HHHHHHHHT....TTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.....tWktIartmg....kgRtlkqcksrwqky 47 + +WT+ E+e+l+++v+++ + Wk+I + gRt+ ++k++w++ GAY61118.1 735 KVPWTAKEEEILKKGVQKFASVddriiPWKKILEFGSsvffGGRTAIDLKDKWRNM 790 579**************988******9987788888**********95 PP

Sequence ? help Back to Top
Protein Sequence Length: 798 aa Download sequence
MDGLADFSSA GSSLLWLWII EYLASFKEVD TSILHDLIET APEIPDDLAK VTREMVALRC 60 LEDLFGSSDK VNNDGLSCTE NKVGFALSES CEDVLQQILQ ETSASDLNIA GPELLKWDVH 120 PFIMHKRALM PKCALQHLKD TILEGTHPLA ASLKESSGLT CVSECGTARV GDLDHNALAM 180 SEKENLLPST CENRDGQPRD NLHIRNMLPF KRSRGDMATR DMAAHTNGVQ EKCDLNYNAK 240 KHKQDAISNH QSADQISVPT CGKEMVEPLS GRDVAVAGRE GSHFSNQSQD AGLEESQFPD 300 DGCDNCNDLR RLGQNGDVND DQIQHNQAED GHNAARLPRA EPVQNATVDE ANITERVPSV 360 GTQHEDTEDE SRGEVEHSCE EETLSDNDAY HNDRIDVAVK KSHFLSSQAA LGHDSLATSG 420 WTEQNLCVKC NKDGQLLSCS SSTCPLAVHE NCLGFPVKFD EKGNFHCPFC AYTLSISEYL 480 EAKKRASVAR KELAAFMQMG SVCHQMDLAN KLHSKDPGHS GSNGDKDIHE NGNVGEQENN 540 QENQNGQHLR DVSDQLCQKH RAKKKKAEPL HDVSDPLCQR HSANKKKAET SASCVNANSP 600 CREEEANAFS GRDCISNGDK VVKENMDNYC PSERGLEGQP ERTPPECGKL ACTNTYVEPM 660 DDTEAEAELQ KEDVQPASSE SSDPPESPVI ALNIDEEEIS ESEDDKFIIS NYSIRFRRPK 720 THYTYPPIPQ LRRKKVPWTA KEEEILKKGV QKFASVDDRI IPWKKILEFG SSVFFGGRTA 780 IDLKDKWRNM CKGSPRSK

Sequence ? help Back to Top

Protein Sequence Length: 798 aa Download sequence

MDGLADFSSA GSSLLWLWII EYLASFKEVD TSILHDLIET APEIPDDLAK VTREMVALRC  60
LEDLFGSSDK VNNDGLSCTE NKVGFALSES CEDVLQQILQ ETSASDLNIA GPELLKWDVH  120
PFIMHKRALM PKCALQHLKD TILEGTHPLA ASLKESSGLT CVSECGTARV GDLDHNALAM  180
SEKENLLPST CENRDGQPRD NLHIRNMLPF KRSRGDMATR DMAAHTNGVQ EKCDLNYNAK  240
KHKQDAISNH QSADQISVPT CGKEMVEPLS GRDVAVAGRE GSHFSNQSQD AGLEESQFPD  300
DGCDNCNDLR RLGQNGDVND DQIQHNQAED GHNAARLPRA EPVQNATVDE ANITERVPSV  360
GTQHEDTEDE SRGEVEHSCE EETLSDNDAY HNDRIDVAVK KSHFLSSQAA LGHDSLATSG  420
WTEQNLCVKC NKDGQLLSCS SSTCPLAVHE NCLGFPVKFD EKGNFHCPFC AYTLSISEYL  480
EAKKRASVAR KELAAFMQMG SVCHQMDLAN KLHSKDPGHS GSNGDKDIHE NGNVGEQENN  540
QENQNGQHLR DVSDQLCQKH RAKKKKAEPL HDVSDPLCQR HSANKKKAET SASCVNANSP  600
CREEEANAFS GRDCISNGDK VVKENMDNYC PSERGLEGQP ERTPPECGKL ACTNTYVEPM  660
DDTEAEAELQ KEDVQPASSE SSDPPESPVI ALNIDEEEIS ESEDDKFIIS NYSIRFRRPK  720
THYTYPPIPQ LRRKKVPWTA KEEEILKKGV QKFASVDDRI IPWKKILEFG SSVFFGGRTA  780
IDLKDKWRNM CKGSPRSK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G58340.2	1e-07	MYB_related family protein