PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY61128.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

NAC

Protein Properties

Length: 256aa MW: 29405.8 Da PI: 9.7514

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY61128.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	35.1	4e-11	108	157	2	50
NAM 2 ppGfrFhPtdeelvveyLkkkvegkk.leleevikevdiykvePwdLpkk 50 p Gf F P+deel++ yLk+k+ +k+ + +++ik+++iy + P+dL ++ GAY61128.1 108 PLGFSFCPNDEELLTVYLKNKLLNKPlPPDADAIKSLNIYMYGPQDLSAT 157 78**********************5334477************743 PP
2	NAM	29.3	2.4e-09	159	203	87	128
NAM 87 gkdkevlsk.kgelvglkktLvfykg..rapkgektdWvmheyrl 128 g++++++ + ++ g kktLvfy+g ++ +++kt+W+m+ey++ GAY61128.1 159 GSSEKIYGSkLKTPLGYKKTLVFYRGkpHQANPTKTSWIMEEYKI 203 556667765345569*******8844566778*******86 PP

Sequence ? help Back to Top
Protein Sequence Length: 256 aa Download sequence
MRTQELIKIA LTFLLTLGKA SSMNEIDEHE HGGRNRARKK NDEHGHGLTD DDDEKKITMM 60 RRRMNADMDQ QTMMRRRKMN LNTIPLGRNL NRGRPPIVGR DLNSNPNPLG FSFCPNDEEL 120 LTVYLKNKLL NKPLPPDADA IKSLNIYMYG PQDLSATPGS SEKIYGSKLK TPLGYKKTLV 180 FYRGKPHQAN PTKTSWIMEE YKIDLNIIQS ESDDPIWTGW VVCKVYNKEK DPRKIEADIE 240 AYSLLKSKAH PIFPSY

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	61	78	RRRMNADMDQQTMMRRRK
2	74	79	MRRRKM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G77450.1	3e-12	NAC family protein