PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY61129.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family NAC
Protein Properties Length: 198aa    MW: 22808.4 Da    PI: 10.0032
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY61129.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM35.72.5e-115099250
         NAM  2 ppGfrFhPtdeelvveyLkkkvegkk.leleevikevdiykvePwdLpkk 50
                p Gf F P+deel++ yLk+k+ +k+  + +++ik+++iy + P+dL ++
  GAY61129.1 50 PLGFSFCPNDEELLTVYLKNKLLNKPlPPDADAIKSLNIYMYGPQDLSAT 99
                78************************5334477**************743 PP
2NAM29.91.6e-0910114587128
         NAM  87 gkdkevlsk.kgelvglkktLvfykg..rapkgektdWvmheyrl 128
                 g++++++ +  ++  g kktLvfy+g  ++ +++kt+W+m+ey++
  GAY61129.1 101 GSSEKIYGSkLKTPLGYKKTLVFYRGkpHQANPTKTSWIMEEYKI 145
                 556677765345569*********8844566778*********86 PP
Sequence ? help Back to Top
Protein Sequence    Length: 198 aa     Download sequence    
MMRRRMNADM DQQTMMRRRK MNLNTIPLGR NLNRGRPPIV GRDLNSNPNP LGFSFCPNDE  60
ELLTVYLKNK LLNKPLPPDA DAIKSLNIYM YGPQDLSATP GSSEKIYGSK LKTPLGYKKT  120
LVFYRGKPHQ ANPTKTSWIM EEYKIDLNII QSESDDPIWT GWVVCKVYNK EKDPRKIEAD  180
IEAYSLLKSK AHPIFPSY
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1320RRRMNADMDQQTMMRRRK
21621MRRRKM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G77450.12e-12NAC family protein