PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY61140.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

C2H2

Protein Properties

Length: 177aa MW: 20234.5 Da PI: 7.0725

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY61140.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	15.4	5.4e-05	39	61	3	23
ET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 3 Cp..dCgksFsrksnLkrHirtH 23 C+ Cgk+F + +L++H +H GAY61140.1 39 CSyeGCGKTFIDAASLRKHAHSH 61 77779**************9888 PP

Sequence ? help Back to Top
Protein Sequence Length: 177 aa Download sequence
MSFVRLCSEK TLKALKEKAK EPEAPEPEPE PTTEVLFLCS YEGCGKTFID AASLRKHAHS 60 HGERQYQCHW KAICIDDLSG EAKKFLDSSK LKDTFLFILE KEITYVLMKA VVSLLYPVIA 120 EDIMGFSKQD SVRRFDCHTI LSVMYPIQGD PMMLKSQAGK WRIMEFSLEN CHYAKAT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G06634.3	2e-18	C2H2 family protein