PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY61144.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family ZF-HD
Protein Properties Length: 162aa    MW: 18787.6 Da    PI: 10.6659
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY61144.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer91.95.7e-29256358
  ZF-HD_dimer  3 kvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRreve 58
                 +v Y+eC++NhAas+G +a+DGCgEf+++ g++gt++a++CaACgCHR+FHR+e +
   GAY61144.1  2 AVSYRECRRNHAASIGRYAYDGCGEFLKA-GKDGTKEAFHCAACGCHRSFHRKELS 56
                 689*************************9.999********************976 PP
Sequence ? help Back to Top
Protein Sequence    Length: 162 aa     Download sequence    
MAVSYRECRR NHAASIGRYA YDGCGEFLKA GKDGTKEAFH CAACGCHRSF HRKELSLSVA  60
SIHRRRRHHD HEHKNYKAKT KRTKITEEQK SKMRRFADKL GWKPQRHDEE EVGKFCGEVG  120
ITRKMFKVWL NNNRRRPVPV RVPEKCRAAS VVGVKNLLAA EE
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
16492RRRRHHDHEHKNYKAKTKRTKITEEQKSK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G24660.12e-33ZF-HD family protein