PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY61175.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family FAR1
Protein Properties Length: 126aa    MW: 14113.7 Da    PI: 11.0106
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY61175.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR154.63.7e-1741124284
        FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkekdgkwevtklele 84 
                 fYn+YAk +GFsv+++++++sk+n+ i ++++vC ++gk+ +++    +  +r r+  r gC  kl+v k+k gk++v  ++++
  GAY61175.1  41 FYNKYAKGAGFSVKINSNRRSKDNNDILRKEYVCFRKGKSLQSSACvGSGLKRCRPIVRDGCGGKLVVVKSKLGKYMVRIFVEK 124
                 ****************************************99888745667889************************988876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 126 aa     Download sequence    
MPKRRTPMKK STTALAKLPT TLILLPHKGQ GFDNLEEAFA FYNKYAKGAG FSVKINSNRR  60
SKDNNDILRK EYVCFRKGKS LQSSACVGSG LKRCRPIVRD GCGGKLVVVK SKLGKYMVRI  120
FVEKLN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G15090.14e-10FAR1 family protein