PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY61192.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family ERF
Protein Properties Length: 239aa    MW: 27319.3 Da    PI: 5.6701
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY61192.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.83.2e-19109158355
         AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                 y+GVr+++ +g+++AeIrd + ng   r+++g+f+tae Aa a+++a+ +++g
  GAY61192.1 109 YRGVRRRP-WGKYAAEIRDSTRNG--VRVWIGTFDTAEAAALAYDQAAFAMRG 158
                 9*******.**********44465..*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 239 aa     Download sequence    
MDSSFCFQYP YSQFSPEYSS SSYSHNTNNS LESFTYKTFN NFHNNHQYLP FNENDSQEML  60
LLEVLNQASA NSMHTISSTS NNNNIKDDHE VSSRAVNATE EGPLKEVSYR GVRRRPWGKY  120
AAEIRDSTRN GVRVWIGTFD TAEAAALAYD QAAFAMRGTT AVLNFPVEKV YESLLEMKYD  180
FEVGSSPVLT LKKRHSMKRK GESKKKIKEK EMRLENVVVF EDLGTEYLEE LLSISDSTC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23240.14e-52ERF family protein