PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY61226.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

E2F/DP

Protein Properties

Length: 428aa MW: 47580 Da PI: 4.6975

Description

E2F/DP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY61226.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	E2F_TDP	86.7	1.7e-27	133	198	1	71
E2F_TDP 1 rkeksLrlltqkflkllekseegivtlnevakeLvsedvknkrRRiYDilNVLealnliekkekneirwkg 71 r+++sL+llt+kf++l++++e+gi++ln++a++L +v ++RRiYDi+NVLe+++liekk kn+i+wkg GAY61226.1 133 RYDSSLGLLTKKFINLIKHAEDGILDLNKAADTL---EV--QKRRIYDITNVLEGIGLIEKKLKNRIQWKG 198 6899****************************...99..**************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 428 aa Download sequence
MSNSQTPQDS SAFKRQLPFS AMKPPFLAPG GDYHRFAATP RRPDQEAEAI VVKSPQLKRK 60 SDTADRDAES SEKTTGPGYT EIVNSPLQTP VSGKGGKAQK TSRLAKNSKI GPQISASNLG 120 SPGNNLTPTG PCRYDSSLGL LTKKFINLIK HAEDGILDLN KAADTLEVQK RRIYDITNVL 180 EGIGLIEKKL KNRIQWKGLD VSRPGEADEN ASSLQAEVES LTIQERRLDE QIRIMQERLR 240 DLSEDENNQK WLFVTEDDIK SLPCFQNETL IAIKAPHGTT LEVPDPDEAV DYPQRRYRIV 300 LRSTMGPIDV YLVSQFEEKF EEIHGAEAPP NLPSNSGFNE NQTATVITEE SRGKEIEVQE 360 QDSQRICTDL SSSQDFVSGI MKIVPSEVDS DADYWLLSDA GVSITDIWRT ERAAEGPEES 420 SRFQGTKE

Sequence ? help Back to Top

Protein Sequence Length: 428 aa Download sequence

MSNSQTPQDS SAFKRQLPFS AMKPPFLAPG GDYHRFAATP RRPDQEAEAI VVKSPQLKRK  60
SDTADRDAES SEKTTGPGYT EIVNSPLQTP VSGKGGKAQK TSRLAKNSKI GPQISASNLG  120
SPGNNLTPTG PCRYDSSLGL LTKKFINLIK HAEDGILDLN KAADTLEVQK RRIYDITNVL  180
EGIGLIEKKL KNRIQWKGLD VSRPGEADEN ASSLQAEVES LTIQERRLDE QIRIMQERLR  240
DLSEDENNQK WLFVTEDDIK SLPCFQNETL IAIKAPHGTT LEVPDPDEAV DYPQRRYRIV  300
LRSTMGPIDV YLVSQFEEKF EEIHGAEAPP NLPSNSGFNE NQTATVITEE SRGKEIEVQE  360
QDSQRICTDL SSSQDFVSGI MKIVPSEVDS DADYWLLSDA GVSITDIWRT ERAAEGPEES  420
SRFQGTKE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G22220.3	1e-169	E2F/DP family protein