PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY61606.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family B3
Protein Properties Length: 112aa    MW: 12841.8 Da    PI: 9.8194
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY61606.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B337.34.7e-1218881783
                E--HHH.HTT.....---..--SEEEEEETTS-EEEEEE..EEETTE.EEE-TTHHHHHHHHT--TT-EEEEE CS
          B3 17 vlpkkfaeeh.....ggkkeesktltledesgrsWevkliyrkksgr.yvltkGWkeFvkangLkegDfvvFk 83
                 +  + ++e+      g+   s+ l++ede+g++W ++l +r+++ r  ++++GW +Fv +++ k+gD vvF 
  GAY61606.1 18 AVESNTIDEFfpafeAGQ--YSQNLVVEDENGERWPFRLFIRQGPYRkPTISAGWLGFVMSKQAKVGDLVVFI 88
                444444444455554334..4568***************88777766699**********************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 112 aa     Download sequence    
MEVYSKILTE TDVSTRLAVE SNTIDEFFPA FEAGQYSQNL VVEDENGERW PFRLFIRQGP  60
YRKPTISAGW LGFVMSKQAK VGDLVVFIKE RAGAIGSAFR YRIRVMKPVK FI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G34170.24e-11ARF family protein